#NEXUS [written Thu May 17 19:11:06 BRT 2018 by Mesquite version 3.31 (build 859) at DESKTOP-HMLF0B5/10.59.138.137] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=44; TAXLABELS Euparkeria_capensis Lagerpeton_chanarensis Dromomeron_gregorii Dromomeron_romeri Ixalerpeton_pallidus Marasuchus_lilloensis Saltopus_elginensis Lewisuchus_admixtus Pseudolagosuchus_major Asilisaurus_kongwe Diodorus_scytobrachion Eucoelophysis_baldwini Silesaurus_opolensis Sacisaurus_agudoensis Pisanosaurus_mertii Scutellosaurus_lawleri Lesothosaurus_diagnosticus Eocursor_parvus Heterodontosaurus_tucki Herrerasaurus_ischigualastensis Staurikosaurus_pricei Sanjuansaurus_gordilloi Panphagia_protos Eoraptor_lunensis Pampadromaeus_barberenai Buriolestes_schultzi Saturnalia_tupiniquim Chromogisaurus_novasi Pantydraco_caducus Efraasia_minor Plateosaurus_engelhardti Chindesaurus_briansmalli Guaibasaurus_candelariensis Tawa_hallae Eodromaeus_murphi Coelophysis_bauri Liliensternus_liliensterni Syntarsus_rhodesiensis Syntarsus_kayentakatae Zupaysaurus_rougieri Daemonosaurus_chauliodus Petrified_forest_teropod Dilophosaurus_wetherelli Nhandumirim_waldsangae ; END; BEGIN CHARACTERS; TITLE 'Matrix in file "Cabreira et al.txt.nex"'; DIMENSIONS NCHAR=258; FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = " 0 1 2 3"; CHARSTATELABELS 258 deepth_of_the_iliac_acetabulum ; MATRIX Euparkeria_capensis 00100?000000?010000000100000(0 1)?1011000000(0 1)0000000000?0001000001000000000000000000010000000?0100101000000000??01000001000000???00000100??0???0??0010000?00?0101000?000000000000010000000000000?000000(0 1)000000000000000000?00?000?000000000000000000010?0000000?000-00 Lagerpeton_chanarensis ??????????????????????????????????????????????????????????????????????????????????????????????1?00000000000???????????????????????????????????0001000-0000010000?000000000000000000100010100010?0010010110000010000100?(0 2)11100?01101000011000001010????00???????-00 Dromomeron_gregorii ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????0000000?01010100-00101210101000000?000010??????????????????????????????????????????-0? Dromomeron_romeri ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????000000010001010000?10121010110000010000100?011100?011010?????????????0?????????????-0? Ixalerpeton_pallidus 0????????????????????????????????????1??11????0????????????????????????????????0?1??0010?0???0100000000000???00????00000??????????????????????0001001?00000?0?0???0?0?0000000000000100010100010?0020010110100010000???????????????????????????????????000001100-?0 Marasuchus_lilloensis ???????????????????????????????????00?1?1?????????0???????????0?000010?????01?0?00000000?0000010000000000?000101000020000?????????????????????(0 1)0101(0 1)0-100001100001101100001110100010(0 1)1001100110?00001101000000?0100001?0010001?00?0010011000000110???000???0100-00 Saltopus_elginensis ??????????????????????????????????????????????????????????????????????????????????????????????????000??????0?10??10??00?10???????????0?1??0????0?????????0???000?????01??1???????????1??1????????????1?????????????????????????00???????1?1???1?1????????????????? Lewisuchus_admixtus ????????0000101??????011?000?0100010011110???0???????????????200000000????01001?1?000000?0?100?01????????????1011?002??0??????????????????????????????????????????????????????????????????????????????0110??100110???????????????????????????????1?000???10110100? Pseudolagosuchus_major ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????10000?110??????00000100?11??111110?????11?10???100?1?10?1?0???????0???????????????????????????????00? Asilisaurus_kongwe ???????????????????????????????????????????????01??????????????00??111?0????0??0?1000000??10101010???10?????01?11?002??????????????????????????000?00?101???1?00??1?1?1?11??111101?01110(0 1)111?101?0001?0200001000100001?1000001200000???????0?????0???10????????000 Diodorus_scytobrachion ??????????????????????0????????????????????????????????????????10?0111?11?????????????????????????????????????????00??00????????????????????????????????????????????????????101111?01(1 2)10?0111(0 1)0?10001????????????????????????????????????????????????1??????????0? Eucoelophysis_baldwini ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????100101111??????111101?012110011?001?0001??11000???????????????????????????????1?1??????????????????0? Silesaurus_opolensis 0?00000?0010000??0???101?110?010100110111000?01010?000001002001100111100(0 1)?1000100110001010101010101011100100(0 1)1111000000000????????????????????10002(0 1)01101001110010101111101110(1 2)111101210(0 1)01110011000100(1 2)110020001010110010?001100010????1010010?10000101?100011000 Sacisaurus_agudoensis ????????0000101?????????0??????????????????????01?????????????11011111011?????????????????????????????????0??11??????????0?????????????????????000(1 2)0??101???1100??1?1?11????1(0 1)(1 2)1111012100011100?1000110111002110101??????????????????????????????????10????????00? Pisanosaurus_mertii ?????????1?0?????????????????????????????????????1?111?0111???1?1111110????????0?????010?????0??0?????????????????????????????????????????????????????????????0???????????2??????????????????????0001?011010?0011?10?1?111?110?11011????1??1?1???0???1?????????00? Scutellosaurus_lawleri ????0????1?0??1???????????0???0????????????????1?0?1?10????2??1201111101??????00??0??0?0??0?101000???10???0001?000011000?0?????00???????0?????01??????00?????11?????1?01??11110002201310(0 1)011111000001102001021111010010211?000001111?????????110?1???1?????????00? Lesothosaurus_diagnosticus 00000000110000100000100110000?00111010?00000101110?011001112001201111101001010?00?0100?0??001?????111?000????1000101100010????0000000??000?0000111111?00001011100?111?010021102002201300011011100000110200102011101??1??1???????1?1?0??01010011??0000100111011?000 Eocursor_parvus 0??????????????????????????????????11???1????????1?11100110????201?1110???????????0?00?1??0??0??001?1?0?0????11???01??01??????????????????????010022000000100?1???111?010?2?1110022013100111111?000011020?102011101??1??????????????????1????????0???100???1111000 Heterodontosaurus_tucki 000011001100121000001001110001?001?001100100101111?111011110001210010100011000000001000000011?1001111?000?000110001120001110001110011001100000011?221000001001100?111?101021??????2??30?0110111?0000110201???0?1????????1??????11??10000101101??101101001110110?00 Herrerasaurus_ischigualastensis 0000101?0000100000100011010001110001000?1?0000100100000100010100000000000?1001?01?111011?0111?00101000111011101?1111(1 2)10101(0 2)10111100001001021102010120-10100011010111111120111111021011001110111?00001002100010011010111101?00200001001101010110100000000110????000 Staurikosaurus_pricei 0??????????????????????????????????????????????0010?00??0?0????0000000000?????00?011?010?0?01?001001001110111?????????????????????????????????1010120-10100011011111111?1??1111102101(0 1)00?111-10?0000110210001000101??????????????????????????????0???000???????000 Sanjuansaurus_gordilloi ????????0000100??????????????????????????????????????????????100000000?????00?11??1110110011100?10101011101??01111???????1???????????????????????????????????0?2011111??????1021021011001111?1000?000002000010001?10?11101?00?01??10?????????????????0?????????00? Panphagia_protos 0??????????????1?0???????????????????????0????1000100011100???11000010000??????0?11110000?1011?010????110?01010?????????????????????????????????002101100??11??000???0111111??????????????1???????????02000010011010011111?00200????????0????????????100?1?????001 Eoraptor_lunensis 0110111?00110111101101111000111001010?????100010001?000010?101(0 1)100000000000???1??00110000011111010100??1??0?00010121210110??100010111100002010100121011101?0110000111011(1 2)121???1??1011??1?1?111?00001102010010011010011111?0020000101110101011111011111111?????001 Pampadromaeus_barberenai 002(1 2)11?100111(0 1)1??0?101011001?1?????????????0???00000?0???001020100001000000???????????????10111010??001?01?1?10??????0?100????????????????????100?2101??0???1?0???1?1???????11110(1 2)1011?011111111??00?10(1 2)0????0????????????????????????????????????11?1001????????0 Buriolestes_schultzi 0?2(1 2)01110011?01???010????010?1110??????????00110001?00?01?010200000000?001?????????????????01110100100110100010??111200110????0???01??????????200121011001?01?0110111?111111(1 2)111021011001111111?00001102000010011010???110?????000100???0011111110100001???????0?1 Saturnalia_tupiniquim 1?????????????????11?1?????????????100?????????00?1???????????11000010000?????10?1?110000010101010010011010101010121201111????????????????????100(0 1)21011001?1110100111011(1 2)1111111021011011111111?00001002010011011010011101?002(0 1)00010?1101011111110???101?1?0101001 Chromogisaurus_novasi ???????????????????????????????????????????????????????????????????????????????????????????????????????????1?????????????1??????????????????????012101?0?1??????????????????????????????1????111????1?0201001101101???????????????????????????????????00???????001 Pantydraco_caducus ????101??0?????????????0??????????101????0?0??10011??0?????10?12?0001001001????01111?000??10???????????????00??00??11?????????????????????????0111???1?1?0010?0???????11(1 2)1???????????????????1??00001??200???00?1?1?0???????????????????0010111210???10111?0110??1 Efraasia_minor 1?2110100020101?111101???1?00????10000000??1??10011101101?01?2120?00110000????10?111100???10101010?0?011010101010121201110011?0101111?1101(1 2)000001022011001?111000011101121111111021011000111111000001002000011011010011211?????00?1001100010111200???10011?0110001 Plateosaurus_engelhardti 11211010002010111111010011(0 1)00?0111000000111100100111011010020212010011100010111011111010011011101001101101010101002120111001100101111111000000001022011101?111010011101121(1 2)111(0 1)102101100011111100000000200001(0 1)111010011201?00200001011100010110200100100110111000(0 1) Chindesaurus_briansmalli ?????????????????????????????????????????????????????????????????????????????????????????????????0??10?1????0????????????????????????????????????1(1 2)(1 2)??1??????1??????????????1011021011001110110?0?001???1?0120001(0 1)10111111?112(0 1)0???????????????????????????????000 Guaibasaurus_candelariensis ??????????????????????????????????????????????????????????????????????????????????????????1?1111100001110?0???0??111?10110???1111111100111?1??100121(0 1)1101??11100?0111(0 1)11?111??????1?11?00?1?11(0 1)10000?012100020011110111101?01200011011100011111110????00????????0(0 1) Tawa_hallae 012211?00020100???1000?001010?0100?1100000100010000000?00?001000000000?001????11112111111?10111?10?000??0?0?001??111(1 2)10100000101110001001011?1?010120?101??011020?1011?1??2?1021022111110111100100001102110120001010111111?1121000110110001111101011100011?1111000 Eodromaeus_murphi 0?1??0??0011010???????1??0????1?00????????0????0000100???0?1?000000000000?0?0011?1???110?0?01?1110?0??????010111?11121011111010?1?0100?110(1 2)1001010210110100111011?10?111??11???1?21?11001?1?????00001012210010011110?111?0?002000011?????0???????0???000???0101000 Coelophysis_bauri 012212?100210011100101111(0 1)0110100112001000010110000100?1000112000000001001111111112111101?101011111110010100110111?1?10110211111110111111121?1210022111101?111021?10111111212?0002211200111110010000(0 1)112220020111110110111?002011011001011110110101000111110???110 Liliensternus_liliensterni ?????????0?1???????????????1??1????????????????0000?00????????000?00?0?00?????11?121?110?11010111?11100?0?????????11110?10??????????1?????????210022011111?121021?10111111212111022112110111110?00001002220020111110010111?0020110?1????1?1101???0???011???????100 Syntarsus_rhodesiensis 01221211?011000110010?101?????10011201??10?1???0000000?????112000000?010011???11112111101?101?1111111001010011111111210?11211111?11111011121?1210122111101?12100??1011111121211102211(1 2)01(0 1)111100?00000112220020111110010111?0020111?1?010111101101011?011?110101110 Syntarsus_kayentakatae 01221211?021010?101101101?10101110???00?1?010010000000?1000112000000?00001????11112111101?101?111111100101??110111???1????????????????????11?1??????1??1???1?1021?101111??2?211102?1120011111001000011122200??????10?1?????????111?1?0??111101???0100011111?1????0 Zupaysaurus_rougieri ?????2???011010?101101011101100011???00?????01100?0100?1000??2000000?0000??1???????????????????????????????????1????????????????????????????????11??????????0????????????????????????????????????0001???????21111110010101?0000010?1??????????????1100??1??????100 Daemonosaurus_chauliodus ?00011???010100?0010???11001001001???00???111010010000?0000000?00000?0000??????10?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????0110??1????????? Petrified_forest_teropod ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????00221111?1??11021?1?111?112?211102?112101111110??0001?0212002111111001010??0??0110?100101?11?1????????11????????10 Dilophosaurus_wetherelli 012(1 2)?2?10010010???11?0101101100101?2011001110010010000110?01110000000?000111110111111210?110101110111011010011011121(1 2)10110???111111101100121?1210022011101?121021?1111111121211102211210(0 1)111110100000002120021111110010101?0021011110010111101101001101111101?0000 Nhandumirim_waldsangae ?????????????????????????????????????????????????????????????????????????????????????????????01??00?10?????10?????????????????????????????????000?2101110??11???????????????11110210110101111111000011??????1011111??1??????????????????1?11?0????????00???????110 ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 2 5 7 - 10 12 - 35 37 - 46 48 - 59 61 63 65 - 82 84 - 114 116 - 122 124 - 138 140 - 146 149 - 156 158 - 159 161 - 170 172 174 176 - 177 180 - 181 183 - 194 196 - 199 203 - 204 206 - 215 217 - 221 223 - 239 241 - 258, ord: 3 - 4 6 11 36 47 60 62 64 83 115 123 139 147 - 148 157 - 160\3 171 173 175 - 178\3 179 - 182\3 195 200 - 202 205 216 222 240; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Mk1 (est.)': 1 - 258; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1526595066717; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 1509203665528375646; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 6671423084202121816; tell It; setSelected 238; attachments ; endTell; mqVersion 331; checksumv 0 3 3127044841 null getNumChars 258 numChars 258 getNumTaxa 44 numTaxa 44 short true bits 15 states 15 sumSquaresStatesOnly 18711.0 sumSquares 18711.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 958 952; setLocation -7 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #1509203665528375646 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.DefaultTrees.DefaultTrees; setAssignedID 994.1488824628202.325696979714371046; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 858 880; setLocation -7 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.arrow; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '(1,((2,((4,3),5)),(6,((9,7,8),((((12,(11,13,14)),(16,17,18,(15,19))),10),((21,(20,22)),(41,((34,32),(35,(33,(26,(24,(25,((28,27),(29,(31,30)),23)))),(44,((36,38,39),37,40,42,43))))))))))));'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow bootstrapFrequency; toggleShow posteriorProbability; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #6671423084202121816 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 132; endTell; setExplanationSize 30; setAnnotationSize 40; setFontIncAnnot 0; setFontIncExp 0; setSize 858 860; setLocation -7 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges on; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames on; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize on; toggleColorsPanel off; toggleDiagonal on; setDiagonalHeight 80; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.categ.SmallStateNamesEditor.SmallStateNamesEditor; tell It; panelOpen true; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; showCharacters #6671423084202121816 #mesquite.lists.CharacterList.CharacterList; tell It; setData 0; getWindow; tell It; useTargetValue off; setTargetValue ; newAssistant #mesquite.lists.DefaultCharOrder.DefaultCharOrder; newAssistant #mesquite.lists.CharListInclusion.CharListInclusion; newAssistant #mesquite.lists.CharListPartition.CharListPartition; newAssistant #mesquite.parsimony.CharListParsModels.CharListParsModels; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 858 880; setLocation -7 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.CharacterList.CharacterListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.CharListAnnotPanel.CharListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; endTell; end;